layout.wrm

Martin Aslett, July 1997

The layout.wrm file is a simple, optional configuration file for AceDB which resides in the wspec directory and allows the database curator or user to change the order and layout of the items appearing on the opening class menu window of xace.

In this respect, it supplants the -V and -H options of the options.wrm file and gives more flexibility to the layout of the window. The list of classes on the menu is no longer rigidly restricted to a pattern of three evenly spaced columns. Using layout.wrm, the classes on the menu can be displayed in any number of columns (if in columns at all) and spaced out using blank lines or extra whitespace to emphasise groupings of related classes. It also allows subclasses to be placed anywhere on the menu (whereas previously they were placed at the end of the list of classes).

Upon executing, xace simply replicates the pattern (including whitespace characters and blank lines) shown in layout.wrm character by character on the class window. For example, the following pattern in layout.wrm :-

 Chromosome    Clone            Author     
 Gene          Sequence         Laboratory      
 Rearrangement Genome_Sequence  Cell        
 Allele        cDNA_Sequence    Pathway    
 Strain        Other_locus      Sequence_map
 Gene_class              
                         Model  Keyset 
will produce the following window layout:-

Altering the above layout.wrm to remove some classes and change the ordering of the others as follows :-

 Chromosome    Clone            Author     Gene          Sequence         
 Laboratory    Rearrangement    Genome_Sequence  
 
 Cell          Sequence_map           cDNA_Sequence    
 Pathway       Allele           Gene_class              
                         
                                  Model  Keyset

will alter the layout of the window to the following slightly less ordered schema :-