ACE97 Proceedings

Summary

Overview - Doug Bigwood

ACEDB meets the Net - Staffan Bergh

Contents of /ace97, 9aug97, 13 MB

Source code SCCS tree, 9aug97, 36 MB

Details

Tutorials

• How to create an ACEDB database - Sam Cartinhour
  Exploring ACEDB models (more detail)
• Complex queries - Jean Thierry-Mieg
• Setting up a WWW interface to ACEDB - Curtis Jamison and Steve Beckstrom-Sternberg
• Setting up a Jade interface to ACEDB - Jean Thierry-Mieg
  Additional installation instructions from Lincoln Stein
• Using GeneFinder - Richard Durbin

Posters

• AC7DB - A Database for Human Chromosome 7 - Michael Otto and Karl-Heinz Grzeschik.

Conference Abstracts

• GrainGenes: An Update on the Genome Database for Small Grains and Sugarcane. Gerard Lazo
• Mendel - The Plant Gene Nomenclature Database. Benedict Arnold
• Pathway Search System Developed in Cell Signaling Networks Database. Takako Igarashi
• Development of External Data Management Tools for ACE-Type Databases. David Grant
• Seizing the Opportunity to Forge Practical Standards for Componentry in Bio-informatics. Nat Goodman/Matt Cowley
• The Joys and Sorrows of an ACEDB Curator: Five years with MycDB. Staffan Berg

Workshop

• Development
  • A C API for ACEDB - Greg Miller
    acelib specification, acelib.h - Jean Thierry-Mieg, 9aug97
  • JaceLib - Mazda Hewitt
  • CORBA/Java - Matthew Cowley
    • "Hello world" example
    • Exceptions example
  • Webace - Pantelis Topalis
    Perl aceclient - Doug Bigwood
  • Gifaceserver - Sean Walsh
  • Query Language - Richard Durbin
    • Syntax
    • Description
  • WinAce - Richard Bruskiewich
  • Displays
    • Metab - Takako Igarashi
    • URL - Simon Kelley
    • Oxgrid - Jo Dicks
• Documentation - Sylvia Martinelli
  • New features to be documented - Sylvia Martinelli
  • ACEDB FAQ revision - Dave Matthews
• New Curators - John Morris
• Advanced Curators: Feature testing and documentation - Dave Matthews
  • Aceclient/server - Sylvia Martinelli
    Description from Jean
  • Graphic aceclient - Sean Walsh
  • Peptide display - Benedict Arnold
  • Forest display - Sam Cartinhour and Mary Anderson
  • Segment loader - Staffan Bergh
  • Constraints - Dave Matthews
  • TableMaker parameters - Matt Couchman
  • Linking to external WWW pages (updated 27oct97) - Carol Scott
  • Metab display - Takako Igarashi
    • Additional notes - Sylvia Martinelli
    • See also the good introduction from Staffan Bergh, may95
  • Subclasses - Takako Igarashi
  • Blixem, efetch - Gerry Lazo
  • Preferences - Carol Scott
  • Aquila - Gerry Lazo
    Hardware benchmarks from Aquila - John Morris
  • Layout.wrm - Martin Aslett
  • New Keyset window features - Martin Aslett
  • Biblio display - Martin Aslett
  • BioMotif - Martin Aslett
  • Gmaps - Sylvia Martinelli
  • Fmap colours and new methods - Laurens Wilming
  • DNA Analysis - Carol Scott
  • Cut and Paste - Laurens Wilming
• Curator tools
• Bug Reports
• Feature Requests